The gap I identified is in fact to allow access to the containers stored in the ships hold.  The containers are stacked over the hatches.  In the case of Colombo Express and that class, there are 3 hatches on each section.  The gap allows a section to be removed without disturbing the adjacent groupings to gain access to the hold.  I found some pictures to support it and one of the guys on Finescale web site who has worked with them confirms it.  
The containers are attached vertically and those blocks on the corners discussed earlier are ISO blocks.  They are standardized so that they can be stacked vertically no matter whose container.  
Containers are further supported at the base by braces.  I think they call them twist on's or something to that effect.  Should be no problem modeling in 1/700 scale, don't you think.   
 
 Thanks for the feedback guys.
Dave